Serveur d'exploration sur la grippe en Espagne

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Genetic diversity of influenza A(H1N1)2009 virus circulating during the season 2010-2011 in Spain.

Identifieur interne : 000324 ( Main/Exploration ); précédent : 000323; suivant : 000325

Genetic diversity of influenza A(H1N1)2009 virus circulating during the season 2010-2011 in Spain.

Auteurs : Juan Ledesma [Espagne] ; Francisco Pozo ; Gabriel Reina ; Miriam Blasco ; Guadalupe Rodríguez ; Milagrosa Montes ; Isabel L Pez-Miragaya ; Carmen Salvador ; Jordi Reina ; Raúl Ortíz De Lejarazu ; Pilar Egido ; José L Pez Barba ; Concepci N Delgado ; María Teresa Cuevas ; Inmaculada Casas

Source :

RBID : pubmed:22071031

Descripteurs français

English descriptors

Abstract

BACKGROUND

Genetic diversity of influenza A(H1N1)2009 viruses has been reported since the pandemic virus emerged in April 2009. Different genetic clades have been identified and defined based on amino acid substitutions found in the haemagglutinin (HA) protein sequences. In Spain, circulating influenza viruses are monitored each season by the regional laboratories enrolled in the Spanish Influenza Surveillance System (SISS). The analysis of the HA gene sequence helps to detect the genetic diversity and viral evolution.

OBJECTIVES

To perform an analysis of the genetic diversity of influenza A(H1N1)2009 viruses circulating in Spain during the season 2010-2011 based on analysis of the HA sequence gene.

STUDY DESIGN

Phylogenetic analysis based on the HA1 subunit of the haemagglutinin gene was carried out on 220 influenza A(H1N1)2009 viruses circulating during the season 2010-2011.

RESULTS

Six different genetic groups were identified among circulating A(H1N1)2009 viruses, five of them were previously reported during season 2010-2011. A new group, characterized by E172K and K308E changes and a proline at position 83, was observed in 12.27% of the Spanish viruses.

CONCLUSION

Co-circulation of six different genetic groups of influenza A(H1N1)2009 viruses was identified in Spain during the season 2010-2011. Nevertheless, at this stage, none of the groups identified to date have resulted in significant antigenic changes according to data collected by World Health Organization Collaborating Centres for influenza surveillance.


DOI: 10.1016/j.jcv.2011.09.032
PubMed: 22071031


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

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<term>Hemagglutinin Glycoproteins, Influenza Virus (genetics)</term>
<term>Hemagglutinin Glycoproteins, Influenza Virus (metabolism)</term>
<term>Humans (MeSH)</term>
<term>Influenza A Virus, H1N1 Subtype (classification)</term>
<term>Influenza A Virus, H1N1 Subtype (genetics)</term>
<term>Influenza A Virus, H1N1 Subtype (metabolism)</term>
<term>Influenza A Virus, H1N1 Subtype (pathogenicity)</term>
<term>Influenza, Human (epidemiology)</term>
<term>Influenza, Human (virology)</term>
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<term>Proline (metabolism)</term>
<term>Seasons (MeSH)</term>
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<term>Espagne (épidémiologie)</term>
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<term>Glycoprotéine hémagglutinine du virus influenza (métabolisme)</term>
<term>Grippe humaine (virologie)</term>
<term>Grippe humaine (épidémiologie)</term>
<term>Gènes viraux (MeSH)</term>
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<term>Phylogenèse (MeSH)</term>
<term>Proline (métabolisme)</term>
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<term>Sous-type H1N1 du virus de la grippe A (classification)</term>
<term>Sous-type H1N1 du virus de la grippe A (génétique)</term>
<term>Sous-type H1N1 du virus de la grippe A (métabolisme)</term>
<term>Sous-type H1N1 du virus de la grippe A (pathogénicité)</term>
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<term>Influenza A Virus, H1N1 Subtype</term>
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<term>Sous-type H1N1 du virus de la grippe A</term>
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<term>Humains</term>
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<term>Variation des antigènes</term>
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<b>BACKGROUND</b>
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<p>Genetic diversity of influenza A(H1N1)2009 viruses has been reported since the pandemic virus emerged in April 2009. Different genetic clades have been identified and defined based on amino acid substitutions found in the haemagglutinin (HA) protein sequences. In Spain, circulating influenza viruses are monitored each season by the regional laboratories enrolled in the Spanish Influenza Surveillance System (SISS). The analysis of the HA gene sequence helps to detect the genetic diversity and viral evolution.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>OBJECTIVES</b>
</p>
<p>To perform an analysis of the genetic diversity of influenza A(H1N1)2009 viruses circulating in Spain during the season 2010-2011 based on analysis of the HA sequence gene.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>STUDY DESIGN</b>
</p>
<p>Phylogenetic analysis based on the HA1 subunit of the haemagglutinin gene was carried out on 220 influenza A(H1N1)2009 viruses circulating during the season 2010-2011.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>RESULTS</b>
</p>
<p>Six different genetic groups were identified among circulating A(H1N1)2009 viruses, five of them were previously reported during season 2010-2011. A new group, characterized by E172K and K308E changes and a proline at position 83, was observed in 12.27% of the Spanish viruses.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>CONCLUSION</b>
</p>
<p>Co-circulation of six different genetic groups of influenza A(H1N1)2009 viruses was identified in Spain during the season 2010-2011. Nevertheless, at this stage, none of the groups identified to date have resulted in significant antigenic changes according to data collected by World Health Organization Collaborating Centres for influenza surveillance.</p>
</div>
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<Day>21</Day>
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<AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Genetic diversity of influenza A(H1N1)2009 viruses has been reported since the pandemic virus emerged in April 2009. Different genetic clades have been identified and defined based on amino acid substitutions found in the haemagglutinin (HA) protein sequences. In Spain, circulating influenza viruses are monitored each season by the regional laboratories enrolled in the Spanish Influenza Surveillance System (SISS). The analysis of the HA gene sequence helps to detect the genetic diversity and viral evolution.</AbstractText>
<AbstractText Label="OBJECTIVES" NlmCategory="OBJECTIVE">To perform an analysis of the genetic diversity of influenza A(H1N1)2009 viruses circulating in Spain during the season 2010-2011 based on analysis of the HA sequence gene.</AbstractText>
<AbstractText Label="STUDY DESIGN" NlmCategory="METHODS">Phylogenetic analysis based on the HA1 subunit of the haemagglutinin gene was carried out on 220 influenza A(H1N1)2009 viruses circulating during the season 2010-2011.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">Six different genetic groups were identified among circulating A(H1N1)2009 viruses, five of them were previously reported during season 2010-2011. A new group, characterized by E172K and K308E changes and a proline at position 83, was observed in 12.27% of the Spanish viruses.</AbstractText>
<AbstractText Label="CONCLUSION" NlmCategory="CONCLUSIONS">Co-circulation of six different genetic groups of influenza A(H1N1)2009 viruses was identified in Spain during the season 2010-2011. Nevertheless, at this stage, none of the groups identified to date have resulted in significant antigenic changes according to data collected by World Health Organization Collaborating Centres for influenza surveillance.</AbstractText>
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<LastName>Montes</LastName>
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<LastName>López-Miragaya</LastName>
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<LastName>Salvador</LastName>
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<ForeName>María Teresa</ForeName>
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<DescriptorName UI="D014644" MajorTopicYN="Y">Genetic Variation</DescriptorName>
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<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<MeshHeading>
<DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D053118" MajorTopicYN="N">Influenza A Virus, H1N1 Subtype</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<region name="Communauté de Madrid">
<name sortKey="Ledesma, Juan" sort="Ledesma, Juan" uniqKey="Ledesma J" first="Juan" last="Ledesma">Juan Ledesma</name>
</region>
</country>
</tree>
</affiliations>
</record>

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